Re: [Freesurfer] editing grey matter or white matter

Hi Karl,

it looks like some type of darkening in the gray and white is going on there. If you put a couple of control points in the white matter where the intensity is less than 110 and rerun with autorecon2-cp it should fix this problem

cheers, Bruce On Sat, 31 Oct 2009, karlkarl wrote:

Hello, freesurfer experts:

I attached one sample picture of the results from autorecon2. In the

bottom of right hemisphere, both the red and yellow line shrink, leaving some tissue outside.

How should I fix these since it involves both grey matter and white

matter editing?

thanks

Karl _________________________________________________________________ ȫРWindows 7£ºÑ°ÕÒ×îÊʺÏÄúµÄ PC¡£Á˽âÏêÇé¡£ http://www.microsoft.com/china/windows/buy/