26 Jun
2014
26 Jun
'14
4:49 p.m.
Hi Fs Experts, I am working on FA ROI analysis for my subjects, I did the following:
1. Mri_vol2vol -mov fa.nii -reg register.dat -fstarg -interp nearest -o fa.anat.mgh
2. Mri_segstat wmparc.mgz --ctab $FREESURFER_HOME/FreeSurferColorLUT.txt -I fa.anat.mgh -sum fa.stats Then I used less fa.stats in order to view the statistics results... my question here is: can I use aparc+aseg.mgz instead of wmparc.mgz in my command line in step 2 in order to exclude the unsegmentedwhite matter in the output stats.
Thanks, Mohamad