Hi, I'm having a problem with stxgrinder-sess. Here is some relevant info:
tkmeg:mikeho[82] source /usr/local/freesurfer/nmr-dev-env SUBJECTS_DIR /space/canada/5/users/mikeho/subjects FUNCTIONALS_DIR /space/canada/5/users/mikeho/brainmapper [tkmeg:~] (nmr-dev-env) which stxgrinder-sess /usr/local/freesurfer/dev/fsfast/bin/stxgrinder-sess [tkmeg:~] (nmr-dev-env) cd /space/canada/5/users/mikeho/vtw_study
When I type: [tkmeg:vtw_study] (nmr-dev-env) stxgrinder-sess -contrast words_vs_nonwords -analysis vtw_eng_syn_vis_all -sf sessid -df sesspar stxgrinder-sess logfile is /autofs/space/canada_005/users/mikeho/vtw_study/log/stxgrinder-sess.060110114213.log nthsess = 1 vtw006_eng_syn_vis time=0.012953 -------- /autofs/space/canada_005/users/mikeho/brainmapper/vtw006_eng_syn_vis contrast words_vs_nonwords (time=0.135684) slice 0 ??? Error using ==> fmri_svbfile Too many output arguments.
Error in ==> /usr/local/freesurfer/dev/fsfast/toolbox/fast_svbslice.m On line 35 ==> err = fmri_svbfile(y,fname);
Error in ==> /usr/local/freesurfer/dev/fsfast/toolbox/fast_stxgrinder2_sess.m On line 167 ==> fast_svbslice(tmp,cesstem,slice,'',mristruct);
omnibus contrasts f and fsig can be generated, however, nothing is generated in the vtw_eng_syn_vis_all contrast directory. I get the same error with the bert tutorial data, and in both std and dev environments. Oddly (or maybe not) stxgrinder0-sess works.
Thanks. Mike Ho