Re: [Freesurfer] labels broblem

I don't think so. If you use version 5.1, it will generate the 2009 labels. doug

LAOUCHEDI MAKHLOUF wrote:

hi everyone i run recon-all -all on some subjects using the 5.1 version of freesurfer and instead of getting aparc.a2009s+aseg.mgz i got aparc.a2005s+aseg.mgz. the components of the cingulate cortex are quite different in both files a2005s and a2009s :

in a2009s i used in my work:

             11108 ctx_lh_G_and_S_cingul-Mid-Post
             11109 ctx_lh_G_cingul-Post-dorsal
             11110 ctx_lh_G_cingul-Post-ventral

and in a2005s the whole labals of the cingulate cortex are :

      1103    ctx-lh-G_cingulate-Isthmus                   
      1104    ctx-lh-G_cingulate-Main_part                  
      1200    ctx-lh-G_cingulate-caudal_ACC               
      1201    ctx-lh-G_cingulate-rostral_ACC               
      1205    ctx-lh-S_cingulate-caudal_ACC                
      1206    ctx-lh-S_cingulate-rostral_ACC               
      1207    ctx-lh-S_cingulate-posterior
      1002    ctx-lh-caudalanteriorcingulate    
      1147    ctx-lh-S_cingulate-Main_part_and_Intracingulate
      1148    ctx-lh-S_cingulate-Marginalis_part

is there any way to get the a2009s cingulate components labels using the a2005s labels in the aparc.a2005s+aseg.mgz.

thanks

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