Hi Baojuan, that coordinate will be mni305 space. Is that what you want?
On 07/06/2016 04:17 PM, Li, Baojuan wrote:
Dear Freesurfer experts,
I am using MNE (with MEG data) to define my ROIs for a connectivity analysis. I am going through the following steps to get the MNI coordinates of the regions:
Morph the subject's brain to fslaverage;
Load the inflated surface of fslaverage to MNE analyze;
Look for regions that are activated during my task;
Use view>show coordinates to show the coordinates of the vertex;
The surface RAS (MRI) coordinates are shown;
Used these coordinates as MNI coordinates.
Because I was using SPM in the past and am quite new to freesurfer, I strongly hope someone can help me to check if I have done it correctly. Thank you so much for your help!
Best wishes, Baojuan
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