Re: [Freesurfer] mri_convert dcm 'Mosaic' 2 mgz

Dear all again,

Thanks for your reply. Please check the error attached when trying to convert the DICOM Mosaic in .mgz file when using mri_convert.

Thanks in advance, Marianna

-----Original Message----- From: freesurfer-bounces@nmr.mgh.harvard.edu [mailto:freesurfer-bounces@nmr.mgh.harvard.edu] On Behalf Of Douglas N Greve Sent: Friday, December 2, 2016 12:17 PM To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] mri_convert dcm 'Mosaic' 2 mgz

It will handle mosaics (as the mosaics that fMRI data will come in). Hard to say what is going on without more specifics (command line, terminal output)

On 12/02/2016 10:26 AM, Marianna Riello wrote:

Dear all,

I am wondering whether mri_convert can compute .mgz files for the reconstructions with the 'Mosaic Format SIEMENS DICOM files'.

I have been computing .mgz with the enhanced format .dcm so far, and it always worked.

I have used mri_convert to compute .mgz from .nii (I previously transformed the mosaic .dcm format in nifti with mricron but the reconstruction failed)

Thanks in advance,

Marianna

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