Hi David - Can you please send us the trac-all.log file for this subject? Without seeing where it stopped and what error messages there are it's hard to guess what's going on.
Thanks, a.y
On Fri, 15 Nov 2013, David Soto wrote:
Hi - trac-all completed in all my Ps except one and I noticed that the dlabel/diff output does not contain all the files
I assessed whether it could be do to poor registration, by checking the aparc+aseg file and looks allright
I also checked the registration of FA maps to standard space by freeview -v $FSLDIR/data/standard/MNI152_T1_1mm_brain.nii.gz dtifit_FA.bbr.nii.gz and seems fine
also
freeview -v brain_anat_orig.nii.gz lowb_brain.nii.gz
which also seems fine
any ideas pls?
thanks!
ds
On Fri, Aug 16, 2013 at 5:14 PM, Anastasia Yendiki ayendiki@nmr.mgh.harvard.edu wrote: I suspect the current problem is caused by poor registration. Have you checked the aparc+aseg and/or the registration from diffusion to anatomical and from anatomical to MNI?
On Fri, 16 Aug 2013, David Soto wrote: