Re: [Freesurfer] mkbrainmask-sess

HI Sebastian,

I made a mod to this in development version, but it operates slightly differently in that you set the "nth" run with -run. Eg, -run 2 would mean to use the 2nd run. Otherwise, if you run it on more than one session, the run that you specify might not exist. Would this work for you?

doug

Sebastian Moeller wrote:

Hi List,

to follow up my mail from several days ago, all mkbrainmask-sess (v3.0.2 centos4 x86_64) really needs to be able to select the run from which to take the run-number are the following lines: case "-run" set run = $argv[1]; shift; breaksw

somewhere between the label "parse_args:" and the command "goto parse_args_return".

Ahoi Sebastian