9 Jun
2016
9 Jun
'16
5:11 p.m.
Hello All,
We have acquired our anatomical images on a Siemens scanner as multiecho MPRAGE sequence (4 echos), and wish to unpack the runs so we can perform morphometric analysis using FreeSurfer. What is the optimal way to convert the DICOM files so we can use them with FreeSurfer tools? Specifically, what command line do you recommend for dcmunpack?
When running the command: dcmunpack –src dicomdir we get the following output: Found 1 unique series: 6 6 3D_T1_MEMPRAGE 7.27 2530 7 unknown ROW 650 dicomdir/mr_0006-e02/3d_t1_memprage-00533.dcm Not sure how to interpret this.
Thanks.
Gaurang Limachia