Re: [Freesurfer] SPMPainting

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On 7/17/17 10:35 AM, Geng Shuang wrote:

I am confused that how to align the brain.img with my functional data in spm...

https://surfer.nmr.mgh.harvard.edu/fswiki/SpmPainting https://surfer.nmr.mgh.harvard.edu/fswiki/SpmPainting

Best wishes!

1. Convert the brain.mgz volume to analyze:

mri_convert $SUBJECTS_DIR/subjectname/mri/brain.mgz brain.img

2. Align brain.img with your functional data in spm (eg, func.img)

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Shuang Geng

Master Candidate

Institute of Cognitive Neuroscience

East China Normal University

No.3663, Zhongshan North Road, Po District

Shanghai 200062, P. R. China

2017-07-17 22:33 GMT+08:00 Geng Shuang <gengsshuang@gmail.com mailto:gengsshuang@gmail.com>:

I am confused that how to align the brain.img with my functional
data in spm...

https://surfer.nmr.mgh.harvard.edu/fswiki/SpmPainting
<https://surfer.nmr.mgh.harvard.edu/fswiki/SpmPainting>

Best wishes!

1. Convert the brain.mgz volume to analyze:

mri_convert $SUBJECTS_DIR/subjectname/mri/brain.mgz brain.img

2. Align brain.img with your functional data in spm (eg, func.img)

____________________________________________________________________________

Irene Geng

Institute of Cognitive Neuroscience

East China Normal University

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