Re: [Freesurfer] recon-all to fsaverage

Hi Jose

can you clarify what you mean by "...to get all the labels that are obtained in each individual subject." You almost certainly don't need to recon fsaverage to do this, but I'm not sure exactly what you mean

cheers Bruce

On Tue, 12 Mar 2019, Laboratorio de Neurociencia Funcional wrote:

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Dear Freesurfers,

I would like to apply recon-all to the fsaverage subject of my sample to get all the labels that are obtained in each individual subject. However, it is not possible because my average subject doesn't contain the file /orig/001.mgz required to run the recon-all. Could you help me to handle this issue?

Many thanks in advance.

Best regards, Jose