You can't use dcmdir-info-mgh as of data collected in August because the file naming has changed. Instead, use dcmunpack (you cannot use the -mgh or -martinos flags anymore either). doug
On 10/19/2012 03:09 PM, qtnguyen@nmr.mgh.harvard.edu wrote:
Dear Freesurfer experts,
I'm trying to run structural reconstruction for two subjects DODASD016 and DODASD017.
DODASD016 was scanned last Wed Oct 10 and last week I was able to findsession DODASD016, run dcmdir-info-mgh, and run recon-all using pbsubmit. However, after this was done I was unable to unpack the Bold& DTI Data from Bourget. We believe that the recon-all didn't work and when we tried to re-run:
(for DODASD016) dcmdir-info-mgh /cluster/archive/301/siemens/TrioTim-35006-20121010-153034-596000 (and for DODASD017) dcmdir-info-mgh /cluster/archive/301/siemens/TrioTim-35006-20121017-153207-445000
...I got the error message "ERROR: finding data"
Can you help me resolve this issue? Or can you direct me to someone who can help?
Thank you!
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