Re: [Freesurfer] ERROR: dimension mismatch between input volume and seg

Hi Kari

I think that's not a real error. They are both surface overlays, just with the nvertices dimension in different slots. You could load one of them into matlab and use reshape to make it the same dimensions as the other, then write it out

cheers Bruce

On Fri, 20 May 2016, Kari Parsons wrote:

Hi,

I'm trying to get some cortical thickness volumes for an ROI that I have (I'm pretty much following the instructions at https://surfer.nmr.mgh.harvard.edu/fswiki/VolumeRoiCorticalThickness verbatim), but for some of my subjects I'm getting errors that look like this when I run mdi_segstats:

ERROR: dimension mismatch between input volume and seg input 1 1 145283 seg 145283 1 1

Does anyone have any thoughts on how to trouble-shoot this one?

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