Hi Kristina - I suspect there's some misregistration, or part of the brain mask (and hence the anatomical segmentation) missing or something like that. Do you mind uploading the tracula directories of this subject for me to take a look at?
https://gate.nmr.mgh.harvard.edu/filedrop2/
Thanks!
a.y
On Thu, 1 Sep 2016, Kristina Jelinkova wrote:
Hello everyone,
I've been using Tracula for a while now with much success (and help from the archive) but I've run into an error I haven't been able to solve. I have several subjects for which trac-all -preproc ends with Segmentation fault (core dumped)
I don't think it's a mistake with my directories, they appear correct and I've ran numerous subjects successfully like this already. The dti data and aparc+aseg also appear normal. I'm attaching the trac-all log and error log from one of these problematic subjects. Any insight would be greatly appreciate!
Thank you,
Kristina Jelinkova