Vina,
See this page: https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/Talairach
(you won't need the tutorial data, just use your subject)
Nick
On Sat, 2008-07-12 at 11:05 -0500, Vina Goghari wrote:
Hi all, I get this error:
Sat Jul 12 10:24:08 CDT 2008 talairach_avi done #-------------------------------------------- #@# Talairach Failure Detection Sat Jul 12 10:24:08 CDT 2008 /pkg/bliss_all_labs/tricam/FEP_Aro/cbx02/mri
talairach_afd -T 0.005 -xfm transforms/talairach.xfm
ERROR: talairach_afd: Talairach Transform: transforms/talairach.xfm ***FAILED*** (p=0.0069, pval=0.0000 < threshold=0.0050) Linux bliss 2.6.9-67.0.15.ELsmp #1 SMP Tue Apr 22 13:58:43 EDT 2008 x86_64 x86_64 x86_64 GNU/Linux
recon-all exited with ERRORS at Sat Jul 12 10:24:08 CDT 2008
So I viewed the talairach transform using tkregister2 and this is what I see for target and moveable. How would I go about fixing something like this:
See attached images.
Thanks, Vina
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer