Re: [Freesurfer] Anatomical ROI analysis

Hi Ting, this is a bug introduced by python3, you must run this script with python2 by either modifying the first line to say: #!/usr/bin/env python2

or by running: python2 $FREESURFER_HOME/bin/asegstats2table --subjects 004 021 040 067 080 092 --segno 11 17 18 --tablefile aseg.vol.table

best, Andrew

On January 20, 2018 at 8:28:19 PM, Ting Li (txli1@ualr.edumailto:txli1@ualr.edu) wrote:

Hi, all experts,

I am studying the AnatomicalROIV6.0 tutorials. In the Anatomical ROI analysis tutorial, the first four part work well. While in the Group stats files, I got an error information like this.

group_analysis_tutorial ting$ asegstats2table --subjects 004 021 040 067 080 092 \

--segno 11 17 18 \ --tablefile aseg.vol.table

File "/Applications/freesurfer/bin/asegstats2table", line 195 print 'ERROR: subjects are not specified (use --subjects SUBJECTS)' ^ SyntaxError: invalid syntax

Thanks for your help.

Ting _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer