Hi Hannah,
This seems like a more general problem with your PATH, but I’m sure Andrew (CCed) has a better idea of what might be going on.
Cheers,
/Eugenio
--
Juan Eugenio Iglesias
ERC Senior Research Fellow
Translational Imaging Group
University College London
http://www.jeiglesias.com
http://cmictig.cs.ucl.ac.uk/
On 20/01/2018, 00:23, "freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Hannah's USC Email" <freesurfer-bounces@nmr.mgh.harvard.edu on behalf of shanluo@usc.edu> wrote:
Hi Freesurfer experts,
I tried to do hippocampus subfield analysis but failed. I got this error message:
#@# Hippocampal Subfields processing (T1 only) left Fri Jan 19 15:27:36 PST 2018
dirname: Command not found.
pwd: Command not found.
pwd: Command not found.
/run_segmentSubjectT1_autoEstimateAlveusML.sh: Command not found.
#--------------------------------------------
#@# Hippocampal Subfields processing (T1 only) right Fri Jan 19 15:27:36 PST 2018
dirname: Command not found.
pwd: Command not found.
pwd: Command not found.
/run_segmentSubjectT1_autoEstimateAlveusML.sh: Command not found.
Your help would be greatly appreciated. Thanks!
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