When the pixel data are flipped, you are actually changing the way that the data are stored on disk (while keeping the direction info in the header constant).
On 05/09/2017 12:52 PM, Shane Schofield wrote:
Dear Doug, I am trying to flip some PET images so that they are in the same orientation as the T1. I came across this post http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg29281.html Can you explain what what it means to change the pixel data? Should I use pix or without pix? For context I am working with PET data (in img/hdr formats) that seemed to have been flipped L/R somehow. Thank you.
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