Hi all,
I have a question about FS installation. Finally I installed FS, but not sure it is complete. For testing FS installation, when I wrote tkmedit bert orig.mgz, It says: Couldn't create output file .xdebug_tkmeditReading /Applications/freesurfer/tktools/tkm_common.tcl Reading /Applications/freesurfer/tktools/tkm_wrappers.tcl Reading /Applications/freesurfer/lib/tcl/fsgdfPlot.tcl Reading /Applications/freesurfer/tktools/tkUtils.tcl
Also I can not close the tksurfer window. Can you please give me advices? Thanks Here is what it brings for tksurfer
tksurfer bert rh pial Couldn't create output file .xdebug_tksurfersubject is bert hemi is rh surface is pial surfer: current subjects dir: /Applications/freesurfer/subjects surfer: not in "scripts" dir ==> using cwd for session root surfer: session root data dir ($session) set to: surfer: /Applications/freesurfer surfer: can't create file surfer.log in cwd surfer: surfer.log created in /tmp surfer: session root data dir ($session) reset to: surfer: /tmp checking for nofix files in 'pial' Reading image info (/Applications/freesurfer/subjects/bert) Reading /Applications/freesurfer/subjects/bert/mri/orig.mgz surfer: Reading header info from /Applications/freesurfer/subjects/bert/mri/orig.mgz surfer: vertices=132934, faces=265864 surfer: single buffered window surfer: tkoInitWindow(bert) surfer: using interface /Applications/freesurfer/tktools/tksurfer.tcl Reading /Applications/freesurfer/tktools/tkm_common.tcl Reading /Applications/freesurfer/tktools/tkm_wrappers.tcl Reading /Applications/freesurfer/lib/tcl/fsgdfPlot.tcl Reading /Applications/freesurfer/tktools/tkUtils.tcl Successfully parsed tksurfer.tcl reading white matter vertex locations... % surfer: Error sending tcl command MoveToolWindow 646 674: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 609 682: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 581 686: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 552 689: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 520 689: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 489 690: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 457 690: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 428 691: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 404 694: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 394 696: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 394 697: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 394 698: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 393 698: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 393 699: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 392 699: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 391 700: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 390 701: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 389 701: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 389 702: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 388 702: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 388 703: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 386 704: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 389 704: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 398 702: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 423 698: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 456 697: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 497 697: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 543 697: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 600 697: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 664 697: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 727 697: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 787 697: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 852 697: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 906 697: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 949 697: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 991 697: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 1032 697: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 1069 692: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 1101 687: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 1130 682: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 1154 677: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 1172 674: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 1185 673: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 1195 673: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 1202 673: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 1206 673: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 1208 673: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 1209 673: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 1210 673: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 1211 673: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 1212 673: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 1215 673: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 1223 671: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 1234 670: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 1247 668: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 1264 665: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 1280 662: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 1295 659: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 1309 657: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 1319 657: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 1325 657: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 1329 657: can't invoke "wm" command: application has been destroyed surfer: Error sending tcl command MoveToolWindow 1330 657: can't invoke "wm" command: application has been destroyed