you wouldn't run it on the stats map - you would run it on the T1-weighted MNI152 volume
On Fri, 8 Jan 2016, John Anderson wrote:
Thanks you Doug, Kindly how can I run recon-all on the statistical map ? my statistical map is an output of TBSS analysis Bests, John Sent: Friday, January 08, 2016 at 1:41 PM From: "Douglas N Greve" greve@nmr.mgh.harvard.edu To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] transform statistical map in MNI to surface If it is in mni152 space, then you can run recon-all on the mni152 T1 map, then use mri_vol2surf with --regheader to map the volume tothe surface, then use tksurfer or freeview to view the resulting map
On 01/08/2016 12:49 PM, John Anderson wrote:
Hi Experts, I have statistical map in MNI space and I want to view it using tksurfer how can i transform this map to a surface ?
Bests, John
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