Ben,
Can you send me the brainmask.mgz and T1.mgz files via the filedrop?
https://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
Nick
On Tue, 2008-10-21 at 10:08 -0400, Wilson, Benjamin wrote:
Hi All,
I reposted this a little earlier but I thought I would repost with all the information that I have
I am running freesurfer on a 64 bit linux machine with 2 quad core Intel Xeon processors and 16 GB of RAM
I have run the recon-all command on all of my images without any problems but when I got to view the final output in tkmedit I get the following error
ERROR: A segfault has occurred. This is not your fault, : but is most likely an unrecoverable error and has : made the program unstable. : : Please send the contents of the file .xdebug_tkmedit : that should be in this directory to analysis-bugs@nmr.mgh.harvard.edu : : Now exiting...
Below is the output of the debug file
tkmedit started: Mon Oct 20 17:47:56 2008
tkmedit.bin anon1 brainmask.mgz -aux T1.mgz
$Id: tkmedit.c,v 1.320.2.5 2008/03/10 14:02:35 nicks Exp $ $Name: stable4 $ Set user home dir to /usr/local/freesurfer/subjects Set subject home dir to /usr/local/freesurfer/subjects/anon1 Using interface file /usr/local/freesurfer/lib/tcl/tkmedit.tcl Tcl: Successfully parsed tkmedit.tcl Tcl: Successfully parsed tkm_functional.tcl
Segfault Entering main loop xDebug stack (length: 2) 01: main() 01: Entering main loop 00: 00:
Any help would be appreciated
Thanks.
Sincerely, Ben Wilson
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