Hi Freesurfers,
I am trying to run an ROI analysis with a structural and functional constraint in Freesurfer 5 and after I run funcroi-table-sess I get the following error:
Parsing the .stats files Building the table.. ERROR: All stat files should have the same segmentations
There is also no .dat file created.
I am using the following commands:
foreach s ( `more sessid` ) mri_cor2label --c $s/mri/aparc+aseg.mgz --id 1035 --l $s/label/lh_insula_aseg.label mri_cor2label --c $s/mri/aparc+aseg.mgz --id 2035 --l $s/label/rh_insula_aseg.label end
funcroi-config -roi R_insula_g_mni.roicfg -label rh_insula_aseg -a constr_sm5_mni_gamma_nopace_cor -contrast allvsfix -thresh 2 -sign pos -map sig -fillthresh .5 funcroi-sess -roi R_insula_g_mni.roicfg -sf sessid funcroi-table-sess -roi R_insula_g_mni.roicfg -a constr_sm5_mni_gamma_nopace_cor_extra -c bfvsfix_script -o R_insula_g_mni.bfvsfix_script.dat -sf sessid
I have tried many things to see what I am doing wrong, but I can't figure it out.
Thanks for any help! Suzanne