For this installation of Freesurfer, you would need to edit csurf to change the line '/usr/sw/bin/tixwish4.1.8.3' to point to your own installation of tixwish, which is not distributed with this freesurfer installation. The newer dev installation does include it though, so you may have better luck installing it.
On Mon, 2005-10-10 at 16:28 -0500, Xander Meadow wrote:
Hi,
Since I'm running Panther I downloaded: freesurfer-Darwin-panther- v2.0.tar.gz and tried to set it up. I got it downloaded and I set up the SetUpFreeSurfer.csh file. But at the beginning of the freesurfer/bin/csurf file is the following lines:
# force local (next line not seen by tcl) \ exec /usr/sw/bin/tixwish4.1.8.3 $0 ${1+"$@"} # goto tcl8.3 #exec $LOCAL_DIR/bin/`uname -s`/tixwish4.1.7.4 $0 ${1+"$@"} # goto tcl7.4
I'm not sure what to make of them except that I get an error when I try to run csurf because I don't have /usr/sw/bin/tixwish4.1.8.3. Am I downloading the wrong file? Or do I just have the settings messed up again? Thanks very much.
Xander
On Oct 7, 2005, at 12:49 PM, Nick Schmansky wrote:
Xander, I haven't encountered this error message, and can't seem to track down its origin. Is it possible to upgrade your 2003 version of freesurfer to a newer version? If not, if you can email me the csurf file found in the $FREESURFER/bin directory, I might be able to figure out the problem. Nick On Thu, 2005-10-06 at 22:50 +0700, xmeadow@uchicago.edu wrote: Hi, I've got a Mac box running OS X 10.3.9 and Freesurfer ,v 1.3 2003/08/05 19: 19:16, and just recently when I start up freesurfer I get an error. To reproduce the error I do: source /Applications/Freesurfer/SetUpFreeSurfer.csh Setting up enviroment for FreeSurfer/FS-FAST $Id: FreeSurferEnv.csh,v 1.3 2003/08/05 19:19:16 kteich Exp $ FREESURFER_HOME /Applications/Freesurfer FSFAST_HOME /Applications/Freesurfer/fsfast AFNI_DIR /Applications/Freesurfer/afni FSL_DIR /Applications/Freesurfer/fsl SUBJECTS_DIR /Users/xmeadow/subjects csurf & Application initialization failed: invalid command name "PNG" Then Freesurfer opens up normally. I was just wondering what this error message means. I've looked online and seen that PNG stands for 'Portable Network Graphics' (I think), but I don't know if I have it installed or if I need it installed. Is there something I can do to get Freesurfer to load without errors? Thanks very much. Xander _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer