That subject only has 5 conditions (#6 is not represented in the par file). The easiest thing to do is to randomly assign one of the other conditions to #6.
doug
Maximilien Chaumon wrote:
Hi Freesurfers,
I'm trying to selxavg3 my data.
My design includes 6 conditions including a 0 rest condition. 3 contrasts have been defined using mkcontrast. The analysis too using mkanalysis.
I use this command line : [/homes/11/chaumon/data] (nmr-std-env) selxavg3-sess -analysis "Analyse_Simple_Confidence" -s S003 -overwrite
Which returns what's in the log file attached. and ends with
Creating Design Matrix Warning: Matrix is singular to working precision.
In fast_selxavg3 at 212
Warning: Matrix is singular to working precision.
In fast_selxavg3 at 212
Warning: Matrix is singular to working precision.
In fast_selxavg3 at 212
Warning: Matrix is singular to working precision.
In fast_selxavg3 at 212
Warning: Matrix is singular to working precision.
In fast_selxavg3 at 212
Warning: Matrix is singular to working precision.
In fast_selxavg3 at 212
Warning: Matrix is singular to working precision.
In fast_selxavg3 at 212
Warning: Matrix is singular to working precision.
In fast_selxavg3 at 212
Warning: Matrix is singular to working precision.
In fast_selxavg3 at 212
ntptot = 693, nX = 15, DOF = 678 Saving X matrix to /autofs/space/bomba_016/users/chaumon/S003/bold/Analyse_Simple_Confidence/Xtmp.mat ??? Error using ==> svd Input to SVD must not contain NaN or Inf.
Error in ==> cond at 40 s = svd(A);
Error in ==> fast_selxavg3 at 248 XCond = cond(XtX);
09-Oct-2009 18:03:13
Salut !
ERROR: fast_selxavg3() failed\n
I'm puzzled. I've been checking and rechecking my design. The problem does not come from the contrasts because I get the same error if I remove them... Any help will be greatly appreciated.
Thanks, Max
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