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Hi Sir/Madam:
I got an error when executing the new version "mri_glmfit-sim" correction for multiple comparisons with permutation at the group level according to FsFastTutorialV6.0.
This was the command I used: "mri_glmfit-sim --glmdir my-glm --perm 1000 1.3 pos --cwp .05 --2spaces"
But it prompted:
mri_surfcluster: could not read surface /home/freesurfer/subjects/fsaverage4/surf/lh.white No such file or directory
after "mri_glmfit simulation done"
However, I've verified that /home/freesurfer/subjects/fsaverage4/surf/lh.white existed and that I had read permission to it. And after I loaded it with freeview -f /home/freesurfer/subjects/fsaverage4/surf/lh.white, the lh.white file was opened in the freeview window while the command line prompted "Did not find any volume geometry information in the surface".
Can you help me with this error? Thank you very much!
Best,
---------------- Ruxue Wang PhD Student, Tsinghua University