Hi, Bruce,
Thanks a lot for your suggestion.
I have another question. To view the thickness map, we first load a surface of the corresponding subject (i.e. ?h.inflated) and then overlap the thickness map on it. So to view the mean thickness map, do I also need to average the volumes/surfaces of the subjects?
Thank you.
Best,
Xiaojing
2010/3/17 Bruce Fischl fischl@nmr.mgh.harvard.edu
Hi Xiaojing,
mris_average_curvature will do it, and I think Doug has some other tools that will as well.
cheers, Bruce On Wed, 17 Mar 2010, Xiaojing Long wrote:
Hi,
I have a question regarding how to average cortical thickness maps.
I have a dataset with 10 MR brain images and I've run recon-all on each of them. So I've got thickness maps ?h.thickness for each subject. I wonder whether freesurfer provides a tool that can average the cortical thickness maps over the dataset.
Thanks.
Best,
Xiaojing
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