Use bbregister, something like:
bbregister --s subjectname --mov 002.mgz --init-fsl --t1 --reg register.dat --o 002.anat.mgz
Guang Zeng wrote:
Hi, there,
I have the two scans (001.mgz and 002.mgz) of the same subject, 001.mgz is used as the input of recon-all .... -autorecon1, now I have a brainmask.mgz using 001.mgz, I want to register 002.mgz using brainmask.mgz as reference volume, which command I can use? tkregister2?
Thanks a lot! Guang
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