Re: [Freesurfer] qdec_glmfit problem

You have to make it manually. See the tutorial for an example. doug

On 06/26/2012 01:01 PM, Nicolai Grüner-Hegge wrote:

Hi Doug,

Thank you for the link. I was able to get up to pre-smoothing my fsaverage surfaces but do not know how to continue to the qdec.table.dat section. Is this a text file I must make manually or is there a code which can put the data of the subjects into this table format (Was the recon-all -s <subjid> -qcache code meant to do this?)? Thank you for your time!

Best Regards, Nicolai

On Wed, Jun 20, 2012 at 4:20 PM, Douglas N Greve <greve@nmr.mgh.harvard.edu mailto:greve@nmr.mgh.harvard.edu> wrote:

Hi Nicolai, have you looked at the qdec tutorial on our wiki page?
It has an example on how to create the table

http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/QdecGroupAnalysis

doug

On 06/20/2012 03:49 PM, Nicolai Grüner-Hegge wrote:
> Dear FreeSurfer,
>
> I am emailing you to ask for your help with the qdec_glmfit
command (I
> got the command from the following link:
> http://www.freesurfer.net/fswiki/qdec_glmfit).
>
> My issue is that I do not know how to turn my raw data into the .dat
> file required by the command (you used qdec.table.dat as an
example).
> Could you please tell me how I can turn my raw data into the
.dat file
> that is required for the qdec_glmfit command to work? Thank you for
> your time!
>
> Best Regards,
> Nicolai
> _______________________________________________
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>
>

--
Douglas N. Greve, Ph.D.
MGH-NMR Center
greve@nmr.mgh.harvard.edu <mailto:greve@nmr.mgh.harvard.edu>
Phone Number: 617-724-2358 <tel:617-724-2358>
Fax: 617-726-7422 <tel:617-726-7422>

Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>

_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to
whom it is
addressed. If you believe this e-mail was sent to you in error and
the e-mail
contains patient information, please contact the Partners
Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to
you in error
but does not contain patient information, please contact the
sender and properly
dispose of the e-mail.