Hello,
I have a dataset of patients with 3 time points each. While 2-time point processing works just fine in the longitudinal stream, when I run a base with 3 time points, the process fails and exits with errors.
Please see the output below:
Resolution: 0 S( 256 256 256 ) T( 256 256 256 ) Iteration(f): 1 -- diff. to prev. transform: 0.160049 Iteration(f): 2mri_robust_template(778) malloc: *** mmap(size=262144) failed (error code=12) *** error: can't allocate region *** set a breakpoint in malloc_error_break to debug MRIalloc(256, 256, 256): could not allocate 262144 bytes for 129th slice
Cannot allocate memory Darwin Jamies-iMac.local 11.4.0 Darwin Kernel Version 11.4.0: Mon Apr 9 19:32:15 PDT 2012; root:xnu-1699.26.8~1/RELEASE_X86_64 x86_64
recon-all -s EB1312_61-66-77_base exited with ERRORS at Wed Sep 26 12:19:11 BST 2012
This is similar to a message on the mailing list from Liz Bowman (30 Jul 2012), in which the response was to get more memory. My command was done on a Mac with 16GB of RAM and ample disk space.
I'd appreciate any help!
Thanks, Jamie Kawadler