What version of freesurfer are you using now and what version was used to process the data? I suspect mixed versions were used. You can rerun with the -clean-aseg flag to start again.
On Wed, 2009-02-11 at 10:43 -0500, Dankner, Nathan (NIH/NIMH) [F] wrote:
Hello all,
I have recently been running some scans with very few defects, but have been encountering a particular error message on occasion when I try to run it through autorecon2 and autorecon3 after a bit of manual correction. The error output is:
MRI_fill: could not read segmentation from aseg.auto_noCC.mgz reading segmented volume aseg.auto_noCCseg.mgz... ERROR: cannot find [subject path]/aseg.auto_noCCseg.mgz No such file or directory
Any suggestions as to why this is happening?
Nathan
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