I just found the command to do this. mri_vol2vol --mov PET --reg mri_coreg.lta --fstarg --o rPET
On Tue, Jun 28, 2016 at 10:48 AM Pradeep tpradeep@gmail.com wrote:
Hello All,
I am trying to extract the SUV values a PET image
mri_segstats --seg wmparc.mgz --sum petsuv.segstats.dat --i rPET --ctab-default
since rPET is supposed to be coregistered to MRI, I did the following
mri_coreg --s MRI --mov PET --lta mri_coreg.lta
which did not generate the coregistered image but just transformation.
Is there a way to generate this image or to just input the mri_coreg.lta as a flag to mri_segstats?
Thanks, Pradeep