Thanks! Unfortunately it won't help; I need specific versions with specific compilation options etc :-(
Juan Eugenio Iglesias Postdoctoral researcher BCBL www.jeiglesias.com www.bcbl.eu
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----- Original Message ----- From: "Stephanie N. DeCross" SDECROSS@mgh.harvard.edu To: "Freesurfer support list" freesurfer@nmr.mgh.harvard.edu Cc: "Douglas N Greve" greve@nmr.mgh.harvard.edu Sent: Wednesday, November 5, 2014 10:33:54 AM Subject: [Freesurfer] Freeview-stable4 error?
Hi,
I'm trying to look at 2 connectivity files (saved in SPM) at the same time using Freeview, but how I've been doing it in the past is no longer working and I haven’t changed anything on my end. What I had been doing:
1. cd to the folder with my connectivity files and typing the shortcut command: stable4 (which does the following: setenv USE_STABLE_4_5_0; source /space/freesurfer/nmr-stable4-env) 2. typing the command: freeview ../../../../N12Trio_avg152T1.nii LSHSxAmyg.covBDI_PosCorr_p05_20vox.img LSHSxAmyg.covBDI_NegCorr_p05_20vox.img_blue.nii.gz
This command used to work fine, but is now giving me the error: freeview.bin: error while loading shared libraries: libvtkverdict.so.vtk5.2.0: cannot open shared object file: No such file or directory
This command DOES work if I don't type the shortcut command stable4 and instead keep using the stable53 environment I was already in (setenv FSL_DIR /usr/pubsw/packages/fsl/4.1.9; source /space/nexus/1/users/avi-tools/enable_avi.csh; setenv SUBJECTS_DIR /autofs/cluster/maury/users/gcoombs/College_Risk/SUBJECTS_DIR_FS53; source /usr/local/freesurfer/nmr-stable53-env).
While I'm not positive it affects anything, I'd rather be consistent with the stable4 way I've been doing it in the past - is there a way to fix it and use Freeview in stable4, or does this freeview.bin error mean that I can no longer use Freeview with stable4?
Thanks, Stephanie
Stephanie N. DeCross Clinical Research Coordinator Psychiatric Neuroimaging Research Program Martinos Center for Biomedical Imaging Massachusetts General Hospital 149 13th Street, Charlestown, MA 02129 Phone: 617-724-3283
Fax: 617-726-4078
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