I'm not sure what you mean. Do you want stats for every cluster regardless of significance? If so, you can run the monte carlo correction with a clusterwise p-value (--cwp in mri_glmfit-sim) of 1.0
On 07/13/2017 11:52 AM, Aman Montazeri wrote:
Hello Friends,
Sorry for the simple question.
I am doing GLM analysis using QDEC between two groups (one discrete variable), then I run the Monte-Carlo clustering and got the stats of my cluster.
My supervisor asked me to get the Stats of blobs/clusters (area and number of vertices in each area) before applying the Monte-Carlo (only after GLM analysis/comparison) I would really appreciate if you could help me with getting those stats, as I can't figure out how to do it.
Thank you, Aman
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer