12 Oct
2006
12 Oct
'06
6:12 p.m.
Hi everyone,
My goal is to have the cortical segmentation in subject's native space in analyze format volume images. the series of commands i run are:
mri_extract_label aparc+aseg.mgz LABELNUM outVolume.mgz mri_convert -rt nearest -rl rawavg.mgz outVolume.mgz outLabelSegmentation.img
the problems I have are: 1- the segmentations I get are noisy 2- the segmentations are not as good as they look like in Surface segmentations and I can clearly see some holes and discontinuities at my final volumes.
any suggestions?
best,
--
Behrang Nosrat Makouei,
Engineering Science,
MICA Lab (MIAL), TASC 9400, SFU.
cell: 778-885-5016