Hi, I've created some labels in tkmedit, but it seems that I can only load one at a time in tksurfer.I can load eithe individually, but if I try to load one label while another is already loaded, tksurfer closes automatically. The output is below. Thanks, Alex
tksurfer 1000040 lh inflated surfer: current subjects dir: /data/flanders/work/alex/freesurfer/subjects_fe surfer: not in "scripts" dir ==> using cwd for session root surfer: session root data dir ($session) set to: surfer: /data/flanders/work/alex/freesurfer/subjects_fe ERROR: cound not stat /data/flanders/work/alex/freesurfer/subjects_fe/1000040/mri/T1/COR-.info. Does it exist? mghRead(/data/flanders/work/alex/freesurfer/subjects_fe/1000040/mri/T1.mgh, -1): could not open file surfer: Reading header info from /data/flanders/work/alex/freesurfer/subjects_fe/1000040/mri/T1.mgz INFO: Volume /tmp/mritotal_14746/nu_8_dxyz.mnc cannot be found. INFO: Volume /tmp/mritotal_14746/nu_8_dxyz.mnc cannot be found. surfer: vertices=127270, faces=254536 corRead(): can't open file /data/flanders/work/alex/freesurfer/subjects_fe/1000040/surf/../mri/orig/COR-.info surfer: single buffered window Xlib: extension "XFree86-DRI" missing on display ":0.0". surfer: using interface /usr/local/freesurfer-dev20050905/lib/tcl/tksurfer.tcl Reading /usr/local/freesurfer-dev20050905/lib/tcl/tkm_common.tcl Reading /usr/local/freesurfer-dev20050905/lib/tcl/tkm_wrappers.tcl Reading /usr/local/freesurfer-dev20050905/lib/tcl/fsgdfPlot.tcl Reading /usr/local/freesurfer-dev20050905/lib/tcl/tkUtils.tcl Read /usr/local/freesurfer-dev20050905/surface_labels.txt, found 95 structures Successfully parsed tksurfer.tcl % 220 unassigned vertices in label - building spatial LUT... assigning vertex numbers to label... 366 unassigned vertices in label - building spatial LUT...
Alex Fornito M.Psych/PhD (clin. neuro.) candidate Melbourne Neuropsychiatry Centre and Department of Psychology The University of Melbourne alexander.fornito@wh.org.au