Hi Antonella, use cvs_avg35 as the subject and ?h.aparc.annot for the annotation.
Antonella Kis wrote:
Hi Doug,
Sorry I bother again I just want to ask you an advice. I was running the code which was sent to me by Don:
vals = fs_tal2surf([-16.92 -29.55 34.44]); ind_lh = find(vals{1}); ind_rh = find(vals{2});
[lh_roinums,lh_roilabels] = fs_read_annotation(fname_annot_lh); [rh_roinums,rh_roilabels] = fs_read_annotation(fname_annot_rh);
if ~isempty(ind_lh) roinum = lh_roinums(ind_lh); roilabel = lh_roilabels{roinum}; elseif ~isempty(ind_rh) roinum = rh_roinums(ind_rh); roilabel = rh_roilabels{roinum}; end
and it works perfect but I am a little confused regarding my data.
I am looking to find the nearst cortical label for my clusters for the DTI data:FA, MD,RD,AD. I registered this data on the CVS space so I wonder if I should use for the fname_annot_lh and fname_annot_rh the annotations from the CVS space not from fsaverage. I tried both and got different locations for my clusters.
Can you please advise me?
Many thansk. Antonella