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Hello Team, I have a nifti file of dimension (256, 256, 156) but once I run the freesurfer recon-all the subregions mask "*aparc.DKTatlas+aseg.mgz*" has a dimension of (256,256,256) due to this I am unable to view the segmentation overlaid on the original image in any dicom viewer.
May I know why freesurfer changes the dimension of the original image and the mask ? Is there any solution for this?
Any help will be highly appreciated. Thank you.