btw, in tksurfer you can type the vertex no you want into the vertex field. If you want to extract it programatically, then you can run something like
mri_segstats --vox vertexno 0 0 --id 1 --i yoursurfacemap.mgh --avgwf out.dat
On 01/23/2017 05:29 AM, Nabin Koirala wrote:
Dear Bruce,
Thank you for the reply but as you mentioned that tksurfer is deprecated, is it possible to do the same from QDEC ? i.e Can I get all the values from the plot (or save the plot) which we get in QDEC for significant cluster ?
Thank you.
Regards, Nabin
On Fri, Jan 20, 2017 at 4:06 PM, Bruce Fischl <fischl@nmr.mgh.harvard.edu mailto:fischl@nmr.mgh.harvard.edu> wrote:
Hi Nabin note that tksurfer is deprecated - we are not developing it anymore. That said, I thing you can type: select_vertex_by_vno <N> at the tcl prompt, where <N> is the number of the vertex you want to select cheers Bruce On Fri, 20 Jan 2017, Nabin Koirala wrote: Dear freesurfer team, I was trying to obtain the values at a vertex in tksurfer and this is what is written in tksurfer manual. ....At first, an empty plot will be displayed in a separate window. To generate a plot for a particular vertex, select a point by clicking on the parametric map at that vertex and the plot window will be updated accordingly. But is it possible to enter the desired vertex and get the plot rather than trying to point the mouse to exact vertex and update the plot because it looks like I am not good at pointing mouse to exact vertex I want. Thank you and excuse me for the naive query. Best, Nabin _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline <http://www.partners.org/complianceline> . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
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