9 Sep
2009
9 Sep
'09
1:15 a.m.
Everyone,
I am having problems with Freesurfer not seemingly appreciating the WM/GM boundary in the temporal lobe. I have attached a screenshot of the problem area which is in the bottom right of the pic.
A large portion of the grey matter is outside the pial surface and the inner boundary does not extend to the edge of the white matter. I have checked the white matter segmentation and edited the aseg volume to correct this problem but after running recon-all again I get the same result. Any ideas?
Chris.
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Dr Christopher Adamson, PhD (Melb.), B Software Engineering (Hons., Monash)
Research Officer
Developmental and Functional Brain Imaging, Critical Care and Neurosciences
Murdoch Childrens Research Institute
The Royal Children’s Hospital
Flemington Road Parkville Victoria 3052 Australia
T 9345 4306
M XXXX XXX XXX
E chris.adamson@mcri.edu.au
www.mcri.edu.au