Hello everyone,
I am running qdec for longitudinal data for the first time and although I have a file that matches the guide on the wiki, the script is looking in a non-exsistant file location (see below). While there is a 1001 file and a 1001_MR1, I am not sure where it is getting the 1001_MR1.long.1001 dir. Any ideas?
"long_mris_slopes --qdec long.qdec.table.dat --meas thickness --hemi lh --do-avg --do-rate --do-pc1 --do-stack --do-label --time years --qcache fsaverage --sd /home/adapt/Cortical_Thickness_Data
Parsing the qdec table: long.qdec.table.dat
Working in SUBJECTS_DIR: /home/adapt/Cortical_Thickness_Data
Working on hemi: lh
Subject-Template: 1001
INFO: 2 TPs in 1001 , mean age: 0.487704918
=============================================================================== SUBJECT 1001 Intersecting Within-Subject Cortex Label
ERROR: /home/adapt/Cortical_Thickness_Data/1001_MR1.long.1001/label/lh.cortex.label does not exist!"