Hi all: After autorecon1 was done, I corrected the talairach registration manually. Next, I rerun autorecon1 on the data, but tal_check still gave the same talAviQA and z-score as non-corrected. What's the problem? Is it necessary to rerun autorecon1? Can we skip autorecon1 and do autorecon2 directly?
My version is FreeSurfer4.3.
Thanks.
Zonglei Zhen