External Email - Use Caution
Not presently, as I would need to install on my personal computer. I can ask HPC IT to replace the file again and retest to see if things replicate...
Erin
________________________________ From: Douglas N. Greve dgreve@mgh.harvard.edu Sent: Friday, November 13, 2020 11:48 AM To: Walsh, Erin erin_walsh@med.unc.edu; freesurfer@nmr.mgh.harvard.edu freesurfer@nmr.mgh.harvard.edu Subject: Re: tkregister issue with reg-feat2anat
Can you run it outside of the HCP?
On 11/13/2020 11:27 AM, Walsh, Erin wrote:
External Email - Use Caution
From the HPC, I am running: freesurfer/7.1.0
Yes, the file is in the /bin:
[edub@longleaf-login1 dicom2nifti]$ ls $FREESURFER_HOME/bin/tkreg*
/nas/longleaf/apps/freesurfer/7.1.0/freesurfer/bin/tkregister2 /nas/longleaf/apps/freesurfer/7.1.0/freesurfer/bin/tkregisterfv
/nas/longleaf/apps/freesurfer/7.1.0/freesurfer/bin/tkregister2_cmdl
________________________________ From: Douglas N. Greve dgreve@mgh.harvard.edumailto:dgreve@mgh.harvard.edu Sent: Friday, November 13, 2020 11:21 AM To: Walsh, Erin erin_walsh@med.unc.edumailto:erin_walsh@med.unc.edu; freesurfer@nmr.mgh.harvard.edumailto:freesurfer@nmr.mgh.harvard.edu freesurfer@nmr.mgh.harvard.edumailto:freesurfer@nmr.mgh.harvard.edu Subject: Re: tkregister issue with reg-feat2anat
What version of FS are you running? Can you find tkregister2_cmdl in $FREESURFER_HOME/bin ?
On 11/13/2020 10:51 AM, Walsh, Erin wrote: