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Hello freesurfer experts, when trying to run ‘ft_prepare_mesh’ command from fieldtrip with MATLAB R2018a, I run into an error.
dyld: lazy symbol binding failed: Symbol not found: ___emutls_get_address Referenced from: /Applications/freesurfer/bin/../lib/gcc/lib/libgomp.1.dylib Expected in: /usr/lib/libSystem.B.dylib
dyld: Symbol not found: ___emutls_get_address Referenced from: /Applications/freesurfer/bin/../lib/gcc/lib/libgomp.1.dylib Expected in: /usr/lib/libSystem.B.dylib
mris_fill -c -r 1 /Users/okadometoshiki/Desktop/SubjectUCI29/freesurfer/surf/lh.pial /private/var/folders/cc/fv5fk09d3hj5g5kx7dg7pqq80000gn/T/tp0a8d7856_136c_4156_bf73_d23f64bbf687_pial.filled.mgz: Aborted reading filled volume... gunzip: can't stat: /private/var/folders/cc/fv5fk09d3hj5g5kx7dg7pqq80000gn/T/tp0a8d7856_136c_4156_bf73_d23f64bbf687_pial.filled.mgz (/private/var/folders/cc/fv5fk09d3hj5g5kx7dg7pqq80000gn/T/tp0a8d7856_136c_4156_bf73_d23f64bbf687_pial.filled.mgz.gz): No such file or directory ERROR: problem reading fname
I’m running this on a iMac, macOS High Sierra 10.13.6, with freesurfer-Darwin-OSX-stable-pub-v6.0.0-2beb96c. From past archives, I think this is because of SIP. So I disabled SIP of OSX, but I run into same errors. I tried different subjects, which caused similar errors. Any ideas would be greatly appreciated, thank you!
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Toshiki Okadome