Hi Martin,
we need the version for "Linux centos4 x86_64" and "Intel iMac".
Another issue I noticed is that the brainmask.mgz from subjTPN.long.subjBase doesn't contain the edits I have done for subjTPN and it is larger than the brainmask from subjTPN. This happened to the 4 subjects I have checked. Please advise how to correct for this. Thanks.
Regards, Zheng Hui
On 11/20/09 10:20 PM, "Martin Reuter" mreuter@nmr.mgh.harvard.edu wrote:
Hi,
this usually happens when the RAS center is incorrect in your data. It is not really a bug, but we prepared a version that does not use the ras coordinates but the center of mass instead for initial alignment. What operating system are you running?
Cheers Martin
On Nov 20, 2009, at 8:24, Bruce Fischl fischl@nmr.mgh.harvard.edu wrote:
yup, looks like a bug. Can you arrange to send the data to Martin?
thanks Bruce On Fri, 20 Nov 2009, Hui Zheng wrote:
Hi all,
We have a problem in longitudinal processing. The mri_robust_template somehow chopped off a part of the brain (attached image). Any idea how to correct this? With this "partial" template, the longitudinal processing of phase 1 and 2 data were also wrong. This is the second subject I was checking. I hope it is not a common problem. I can provide the subject's data if necessary.
Thanks, Zheng Hui