it is the input to the white/pial surface deformation. Usually it is identical to the brain.mgz, unless you edit things like pial vessels (I think: Allison can correct me if I'm wrong as this has changed from time-to-time)
cheers Bruce On Sun, 24 Sep 2017, Fereshte wrote:
Dear Experts,What is "brain.finalsurfs.mgz" file? I mean it is the output of which stage in recon-all pipeline? I couldn't find any information about this output on the site. Thank you. Cheers