Dear FS experts,
I have a recon-all error regarding one of my subjects. The scan suffers from weakened signals at the lower part of the brain. Skullstrip stripped most of the cerebellum at first, and we fixed it manually. After running recon-all for the first time, large portions of the temporal lobes were left out of the brain. Knowing that this may not be the correct way, we still tried to fixed that by adding lots of control points. The second run of recon-all, then, came back with the following error message:"
Loading source data Reading curvature file /space/mdeh3/3/halgdev/projects/nyuproj/subjects/sub4422b/surf/rh.thickness ERROR: number of vertices in /space/mdeh3/3/halgdev/projects/nyuproj/subjects/sub4422b/surf/rh.thickness does not match surface (192226,134773) ERROR: reading curvature file Linux mmil-compute-1-11.local 2.6.18-308.16.1.el5 #1 SMP Tue Oct 2 22:01:43 EDT 2012 x86_64 x86_64 x86_64 GNU/Linux recon-all -s sub4422b exited with ERRORS at Mon May 20 "
Any ideas for why it is, or how we can fix the problem at the temporal lobes, will be really appreciated.
Thanks, Cherry
