Hi Octavian
1. Yes, there is a write_annotation.m that you can use. 2. We output an annot of the max probability labels at each point I think called BA_exvivo.thresh.annot
Cheers Bruce
From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu On Behalf Of Octavian Lie Sent: Friday, January 8, 2021 11:26 AM To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] write .annot files
External Email - Use Caution Dear All,
These are probably rookie questions. 1. I can read an .annot file with read_annotation.m, is there a way to write one? (for example read it to matlab, modify, and save, or create a combined (lh+rh) aparc.annot file etc.
2. On the same line, how one combines all the Brodmann labels into a Brodmann parcellation, if not done already.. Thank you, Octavian