External Email - Use Caution
Thanks, Kersten!
The design matrix X has a dimension of 47x6 and the contrast matrix CM.C has a dimension of 3x17. I wish to know the steps to correct this error?
Thanks again for your kind help!
With regards Korann
On Mon, Nov 23, 2020 at 10:31 PM freesurfer-request@nmr.mgh.harvard.edu wrote:
Send Freesurfer mailing list submissions to freesurfer@nmr.mgh.harvard.edu
To subscribe or unsubscribe via the World Wide Web, visit https://secure-web.cisco.com/1Yf2I0SaCp4AVxLwAORs81BeTMH0g33xRhY1CDT68ohUBJ0... or, via email, send a message with subject or body 'help' to freesurfer-request@nmr.mgh.harvard.edu
You can reach the person managing the list at freesurfer-owner@nmr.mgh.harvard.edu
When replying, please edit your Subject line so it is more specific than "Re: Contents of Freesurfer digest..."
Today's Topics:
- Re: License error on Windows Subsystem for Linux (Shen Lunhao)
- smooth longitudinal analysis {Disarmed} (Agurne Sampedro Calvete)
- Re: Error in longitudinal pipeline {Disarmed} (Diers, Kersten /DZNE)
- Smoothing GWC mgh data (Valentina Meregalli)
Message: 1 Date: Mon, 23 Nov 2020 06:26:28 +0000 From: Shen Lunhao lunhao0104@hotmail.com Subject: Re: [Freesurfer] License error on Windows Subsystem for Linux To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Message-ID: < DM6PR02MB6493EB25230B280B7DCFF288DBFC0@DM6PR02MB6493.namprd02.prod.outlook.com
Content-Type: text/plain; charset="gb2312"
External Email - Use CautionHi Andrew,
The following is the information of four systems. System #3 and #4 are same configuration where license error occurred.
#1 #2 #3 #4 Core Intel(R) Xeon(R) CPU E5-2620 Intel i7 AMD R9 5900X AMD R9 5900X Mem 32GB 16GB 32GB 32GB Platform Linux version 4.15.0-112-generic (buildd@lcy01-amd64-027) (gcc version 7.5.0 (Ubuntu 7.5.0-3ubuntu1~18.04)) Window subsystem for linux(WSL2) + Ubuntu20.04 Window subsystem for linux(WSL2) + Ubuntu20.04 Window subsystem for linux(WSL2) + Ubuntu20.04
Worked Worked Didn?t work Didn?t work The freesurfer package I used is freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0which downloaded from freesurfer website. The license file was four lines type. Hope this information is helpful.
Thanks, Lunhao
From: freesurfer-bounces@nmr.mgh.harvard.edu < freesurfer-bounces@nmr.mgh.harvard.edu> ?? Hoopes, Andrew < AHOOPES@mgh.harvard.edu> Date: 2020?11?21? 1:19 Reply-To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] License error on Windows Subsystem for Linux
Hi Lunhao,
Interesting. Can you provide some details on the configurations where this worked? Were you using the same linux subsystem and windows versions?
thanks
Andrew
From: freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Shen Lunhao < lunhao0104@hotmail.com> Reply-To: FS Help freesurfer@nmr.mgh.harvard.edu Date: Friday, November 20, 2020 at 2:44 AM To: FS Help freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] License error on Windows Subsystem for Linux
External Email - Use CautionHello FreeSurfer Developers,
I'm attempting to use freesurfer 5.3.0 on Windows Subsystem for Linux (Ubuntu 20.04), but I got license error message as described below:
ERROR: Invalid FreeSurfer license key found in license file /space/tools/freesurfer/5.3.0/license.txt
If you are outside the NMR-Martinos Center,
go to http://secure-web.cisco.com/1gwoaE20Y7b27ULq16GgvwkvDuYOzRdARFYzw1XJCoskz3-o... to
get a valid license file (it's free).
If you are inside the NMR-Martinos Center,
make sure to source the standard environment.
I tried with the same 5.3.0 packages and same license file on four different computers, and two of them work well with the other two got similar license error. Does anyone have any thoughts on how to trouble-shoot this one?
FreeSurfer version: freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0
Platform: Windows Subsystem for Linux (Ubuntu 20.04)
uname -a: Linux DESKTOP-SJ2K1B2 4.4.0-19041-Microsoft #488-Microsoft
Mon Sep 01 13:43:00 PST 2020 x86_64 x86_64 x86_64 GNU/Linux
Best, Lunhao