Hi Alexander,
Would it be possible to send me the volume file and one surface file that has this shift problem?
Thanks, Ruopeng
On 11/10/10 9:10 PM, Alexander Hunold wrote:
Dear experts,
I am perplexed how to fix the problem which is shown in the pictures. The volume is the T1.mgz. The surfaces are computed by MNE (red -- inner_skull, yellow -- outer_skull, green -- outer_skin). In TkMedit the inner and outer skull are aligned to the T1.mgz, respectively.
I used <mne_watershed_bem> and <mne_setup_forward_model> to get the surfaces.
I get the same shift with all surfaces I compute with mne_write_surface, as well.
Since I would like to visualize 3-4 surfaces with a mri volume I would like to use freeview instead of TkMedit.
Do you have any hint how to fix that shift problem?
Thanks so much, Alexander
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