Re: [Freesurfer] recon-all problem

You'll need to run dcmunpack without the -martinos flag. This will (eventually) give you a list of runs and corresponding file names. Find the one that is the MPRAGE you want to recon, and pass that as -i to recon-all. Unfortunately the name change makes it harder/slower to unpack data here. doug

On 09/14/2012 11:06 AM, Eiran Vadim Harel wrote:

Hi all, Is there a change in the unpacking of the MPRAGE and DICOM files? The names of the files have changed. what file name should be put in the command: recon-all -i./file name -s subjectname Thanks, Eiran _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer